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Atlantis API (SMS API) documentation
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Atlantis API (SMS API) documentation

Getting Started

  • Installation
  • Quickstart

User Guide

  • End-to-End Workflow
  • Running a Sensitivity Campaign on AWS
  • Choosing a Client Application
  • CLI Reference
  • Analysis Data Filtering

Compose Subsystem

  • Compose Subsystem Overview
  • v2ecoli: Whole-Cell E. coli via Process-Bigraph
  • Process Runtime (REST-Process Mirror)
  • BioModels Integration
  • PBG Live Sandbox
  • PBG Wrapper Generation

Reference

  • Configuration
  • Typical Run Times

Architecture (Internal)

  • Architecture Overview
  • AWS S3 Setup for SMS API
  • Qumulo S3 Storage Setup Guide
  • AWS Batch Workflow Architecture Analysis
  • Multi-Arch Build Pipeline — AWS Batch with Docker-outside-of-Docker (DooD)
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